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H. Terao, T. Sugawara, Y. Kita, N. Sato, E.
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Takakura, M. Ishimaru, K. Yasuda, T. Sugawara,
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ChemPhysChem, submitted.
M. Ishimaru, T. Toyota, K. Takakura, T.
Sugawara, Y. Suagawara,
Helical Aggregate of Oleic Acid and Its
Dynamics in Water at pH 8. Langmuir, submitted.
T. Toyota, K. Takakura, T. Sugawara,
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K. Shohda, T. Sugawara,
Toward An Artificial Cellular Life: DNA
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Matsuura, M., Yamaguchi, M., Ko-Mitamura,
E. P., Shima, Y., Urabe, I., Yomo,T.
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compartment formation for a self-encoding system.
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mso-ascii-font-family:Century）
PNAS, USA, 99(11): 7514-7517.
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Nakaishi, T. Ko-Mitamura,E. P.,
Shima,Y.,Urabe, I., Yomo, T. (2001)
"Synthesis of functional
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Bioeng., 92: 590-593.
Kashiwagi, A., Noumachi, W., Katsuno, M.,
Alam, T. M., Urabe, I., Yomo, T.
"Plasticity of fitness
and diversification process during an experimental molecular evolution"
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Nakaishi, T., Ishizuka, M., Iio, K., Yomo,
T., Inokuchi, Y., kajitani, M.,
Yamamoto, K., Shima, Y., Urabe, I. (2000)
" Purification and
characterization of Qβ replicase with a His-tag. J. Mol. Catal. B:"
Enzymatic, 10: 351-356.
Todoriki, M., Oki, S., Matsuyama, S.,
Ko-Mitamura, E. P., Urabe, I.,Yomo, T.
"An observation of the
initial stage towards a symbiotic relationship."
BioSystems., 65（2002)105-112
Nakaishi, T., Iio, K., Yamamoto, K., Urabe,
I., Yomo, T.
"Kinetic properties of Qβ replicase,
an RNA dependent RNA polymeraseh."
J. Biosci.Bioeng., 93: (2002)322-327.
Tokuriki N, Kinjo M, Negi S, Hoshino M,
Goto Y, Urabe I, Yomo T.
"Protein folding by the
effects of macromolecular crowding"
Protein Sci. 2004 Jan13(1):125-33.
Shohda K, Toyota T, Yomo T, Sugawara T.
"Direct Visualization of
DNA Duplex Formation on the Surface of a Giant Liposome."
Chembiochem. 2003 Aug 44(8):778-781.
Hayashi Y, Sakata H, Makino Y, Urabe I,
Yomo T.
"Can an arbitrary
sequence evolve towards acquiring a biological function? "
J Mol Evol. 2003 Feb56(2):162-8.
Yamauchi A, Nakashima T, Tokuriki N,
Hosokawa M, Nogami H, Arioka ,S, Urabe I, Yomo T.
"Evolvability of random
polypeptides through functional selection within a small library."
Protein Eng. 2002 Jul15(7):619-26.
Terada TP, Sasai M, Yomo T.
"Conformational change
of the actomyosin complex drives the multiple stepping movement."
Proc Natl Acad Sci U S A. 2002 Jul
999(14):9202-6. Epub 2002 Jun 24.
Okabayashi, K., Shoji, H., Onuma, Y.,
Nakamura, T., Nose, K., Sugino, H., and Asashima, M.
"cDNA Cloning and
Distribution of the Xenopus Follistatin-Related Protein Biochem"
Biophys. Res. Commun.. 254, 42-48 (1999)
Chan, T., Ariizumi, T., and Asashima, M.
"A Model system for Organ
Engineering: Transplantation of in vitro Induced Pronephros"
Natur wissenschaften 86, 224-227 (1999)
Miyanaga, Y., Shiurba, R., and Asashima, M.
"Blood cell induction in
Xenopus animal cap explants: effects of fibroblast growth factor, bone
morphogenetic proteins, and activin"
Dev. Genes Evol. 209, 69-76 (1999)
Asashima, M., Kinoshita, K., Ariizumi, T.,
and Malacinski, G. M.
"Role of Activin and
Other Peptide Growth Factors in Body Patterning in the Early Amphibian Embryo"
Int. Rev. Cytology 191, 1-52 (1999)
Tamai, K., Yokota, C., Ariizumi, T., and
Asashima, M.
"Cytochalasin B inhibits
morphogenetic movement and muscle differentiation of
activin-treated ectoderm in Xenopus
Develop. Growth Differ. 41,
41-49(1999)
Asashima, M., Yokota, C., Takahashi, S.,
Lau, C. L. and Malacinski,G. M.
"Peptide growth factors
in amphibian embryogenesis: intersection of
modern molecular approaches with
traditional inductive interaction paradigms"
Int. J. Dev. Biol. 43, 1-10 (1999)
Kuroda, H., Sakumoto, H., Kinoshita, K. and
Asashima, M.
"Changes in the adhesive
properties of dissociated and reaggregated Xenopus laevis
embryo cells"
Develop. Growth Differ. 41, 283-291 (1999)
Ariizumi, T., Komazaki, S. and Asashima, M.
"Activin-treated Urodele
Animal Caps: II. Inductive Interactions
in Newt Animal Caps After Treatment with Activin A"
Zoological Science, 16(1), 115-124
(1999)
Yamashita,M., Izumi-Kurotani,A.,
Imamizo,M., Mogami,Y., Koike,H., Komazaki,S., Asashima, M.
"Bio Experiment on Space
Flyer Unit: Effects of Gravity on Early Development of Japanese Red Bellied
Newt"
J. Space Technology and Science 13(2),
12-17(1999)
Ninomiya, H., Takahashi, S., Tanegashima,
K., Yokota, C. and Asashima, M.
"Endoderm
differentiation and inductive effect of activin-treated ectoderm in Xenopus"
Develop. Growth Differ. 41, 391-400 (1999)
Fukui, A., Shiurba, R., Asashima, M.
"Activin Incorporation
into Vitellogenic Oocytes of Xenopus Laevis"
Cellular and Molecular Biology 45(5),
545-554 (1999)
Hayata, T., Eisaki, A., Kuroda, H.,
Asashima, M.
"Expression of
Brachyury-like T-box transcription factor, Xbra3 in Xeopus embryo"
Dev. Genes Evol. 209, 560-563 (1999)
Hayata, T., Kuroda, H., Eisaki, A. and
Asashima, M.
"Expression of Xenopus
T-box transcription factor, Tbx2 in Xenopus embryo"
Dev. Genes Evol. 209, 625-628 (1999)
Ariizumi, T., Takano, K., Asashima, M and
Malacinski, G.M.
"Bioassays of Inductive
Interactions in Amphibian Development"
Methods in Molecular Biology 135:
Developmental Biology Protocols 1,89-112 (1999)
Onuma, Y., Nishinakamura, R., Takahashi,
S., Yokota, T. and Asashima, M.
"Molecular Cloning of a
Novel Xenopus spalt Gene (Xsal 3)"
Biochemical and Biophysical Research
Communications 264, 151-156 (1999)
Shiurba, R., Hirabayashi, T., Kiyokawa, S.,
Fukui,A.,Miyanaga, Y.,Kojima, I.and AsashimaM.
"Evidence that
Far-Infrared Radiation Promotes Growth of Xenopus Laevis"
Adv. Space Res. 23(12), 2041-2044 (1999)
Ariizumi, T., Asashima, M.
"In vitro control of
organogenesis and fundamental embryonic form by the peptide growth factor
activin"
J. Artif Organs 2, 117-123 (1999)
Nishinakamura, R., Matsumoto, Y., Matsuda,
T., Heike, T.,Asashima, M. and Yokota, T.
"Activation of Stat3 by
cytokine receptor gp130 ventralizes Xenopus embryos independently
of BMP-4"
Dev. Biol. 216, 481-490 (1999)
Asashima, M., Ariizumi, T., Takahashi, S.
and Malacinski, G.M.
"Bioassays for Studying
the Role of the Peptide Growth Factor Activin in Early Amphibian Embryogenesis"
Methods in Molecular Biology 136:
Developmental Biology Protocols II
15-26 (1999)
Furue, M., Okamoto, T. and Asashima, M.
"Effect of TGF-β on
morphogenesis in rat salivary gland-derived RSMG-1 Cells"
Tiss. Cult. Res. Commun. 18:339-343 (1999)
Kuroda, H., Hayata, T., Eisake, A. and
Asashima M.
"Cloning a novel
developmental regulating gene, Xotx5 : its potential role in anterior formation
in Xenopus laevis"
Develop. Growth Differ. 42,
87-93 (2000)
Moriya, N., Komazaki, S. and Asashima, M.
"In vitro organogenesis
of pancreas in Xenopus laevis dorsal lips treated with retinoic acid"
Develop. Growth Differ. 42, 175-185 (2000)
Oka, T., Shiojima, I., Monzen, K., Kudoh,
S., Hiroi, Y., Shiokawa,K., Asashima, M.,Nagai, R., Yazaki, Y. and Komuro, I.
"FGF Plays a Critical
Role in SM22α Expression during Xenopus Embryogenesis"
Arteriosclerosis, Thrombosis, and Vascular
biology, 907-914 (2000)
Sato, A., Asashima, M., Yokota, T. and
Nishinakamura, R.
"Gene expression pattern
Cloing and expression pattern of a Xenopus pronephros-specific gene, XSMP-30"
Mech. Dev.92, 273-275 (2000)
Asashima, M., Ariizumi, T. and Malacinski,
G.M.
"In vitro control of
organogenesis and body patterning by activin during early amphibian
development"
Comparative Biochemistry and Physiology
126, 169-178 (2000)
Malacinski, G.M., Ariizumi, T. and
Asashima, M.
"The renaissance in
amphibian embryology"
Comparative Biochemistry and
Physiology 126, 179-187 (2000)
Chan, Te-Chuan and Asashima, M.
"Development of the
embryonic kidney"
Clin. Exp. Nephrol, 4, 1-10 (2000)
Onuma, Y., Nishihara, R., Takahashi, S.,
Tanegashima, K., Fukui,A. and Asashima, M.
"Expression of the
Xenopus GTP-binding protein gene Ran during embryogenesis
style='font-family:"ＭＳ mso-hansi-font-family:
Century'> Development style='font-family:
"ＭＳ "
Genes and Evolution 210, 325-327 (2000)
Eisaki, A., Kuroda, H., Fukui, A. and
Asashima, M.
"XSIP1, a Member of
Two-Handed Zinc Finger Proteins, Induced Anterior Neural Markers
in Xenopus laevis Animal Cap"
Biochemical and Biophysical Res. Com. 271,
151-157 (2000)
Tanaka, K., Okabayashi, K., Asashima, M.
Perrimon, N. and Kadowaki, T.
"The evolutionarily
conserved porcupine gene family is involved in the processing of the Wnt
family"
Eur. J. Biochem. 267, 1-13 (2000)
Fukui, A., Kishida, S. Kikuchi, A. and
Asashima, M.
"Effect of rat Axin
domains on axis formation in Xenopus embryos"
Develop. Growth & Differ. 42(5) ,
489-498 (2000)
Moriya, N., Komazaki, S., Takahashi, S.,
Yokota, C. and Asashima, M.
"In vitro pancreas
formation from Xenopus ectoderm treated with activin and retinoic acid"
Develop. Growth & Differ. 42(6) ,
593-602 (2000)
Kadoya, T., Kishida, S., Fukui, A., Hinoi,
T., Michiue, T., Asashima,M. and Kikuchi, A.
"Inhibition of Wnt
Signaling Pathway by A Novel Axin-binding Protein"
J. Biol. Chem. 275(47), 37030-37037
Tanegashima, K., Yokota, C., Takahashi, S.
and Asashima, M.
"Expression cloning of
Xantivin, a Xenopus lefty/antivin related gene, involved in the regulation of
activin signaling during mesoderm induction"
Mech. Develop.
99, 3-14 (2000)
M. Furue, T. Okamoto, S. Koshika and M. Asashima
"Isoleucine Prevents rat
salivary gland epithelial cells from Apoptosis in Serum-Free Culture"
In Vitro Cell. Dev. Biol.-Animal
36:287-289,May2000,2000 Society for In Vitro Biology
Sakamoto,I., Kishida,S., Asashima, M.
,Kikuchi, A., et.al.
"A Novel βーCatenin Binding Protein Inhibits β-Catenin-dependent Tcf Activation and Axis
Formation"
J. Biol. Chem. 275(42), 32871-32878, 2000
M. Nakaya, A.Fukui, Y.Izumi, K.Akimoto,
M.Asashima and S.Ohno
"Meiotic maturation
induces animal-vegetal asymmetric distribution of aPKC and ASIP/PAR-3 in
Xenopus oocytes"
Development 127, 5021-5031, 2000
M. Asashima, T. Ariizumi, T. Hayata, A.
Sato and A. Fukui
"Control of
organogenesis and body plan formation during early amphibian development"
Stem Cell and Cell Differentiation,
Proceedings June 22-24, 20-21, 2000
S. Takahashi, C. Yokota, K. Takano, K.
Tanegashima, Y. Onuma, J.Goto and M. Asashima
"Two novel nodal-related
genes initiate early inductive events in Xenopus Nieuwkoop center"
Development 127, 5319-5329 (2000)
S.W. Cheong, A. Fukui, M. Asashima and C.J.
Pfeiffer
"Spontaneous
Thyroid-containing Teratoma Associated with Impaired Development in the African
Clawed Frog, Xenopus laevis"
J. Comp. Path.
123, 110-118, 2000
A.Fukui, S. Kishida, A. Kikuchi and M. Asashima
"Effects of rat Axin
domains on axis formation in Xenopus embryos"
Develop. Growth Differ. 42,489-498, 2000
Te-chuan Chan, S. Takahashi and M. Asashima
"A Role for Xlim-1 in
Pronephros Development in Xenopus laevis"
Develop. Biol. 228, 256-269,
2000
S. Hino, S. Kishida, T. Michiue, A. Fukui,
I. Sakamoto, S. Takada,M. Asashima, A. Kikuchi style='font-family:
"ＭＳ
"Inhibition of the Wnt
Signaling Pathway by Idax, A Novel Dvl-binding Protein"
Mol. Cell Biol., 330-342, 2000
Junji Ichigi and Makoto Asashima
"Dome Formation and
Tubule Morphogenesis by Xenopus Kidney A6 Cell Cultures Exposed to Microgravity
Simulated with A 3D-Clinostat and to Hypergravity."
In Vitro Cellular and Developmental Biology
−Animal. 37. 31-44, 2001
Makoto Asashima and Tokindo S. Okada
"Spemann's influence on
Japanese Developmental Biology."
J. Dev. Biol. 45, 57-65, 2001
Takashi Ariizumi and Makoto Asashima
"In vitro induction
systems for analyses of amphibian organogenesis and body patternig."
J. Dev. Biol. 45, 273-279, 2001
Miho Furue, Yan Zhang, Tetsuji Okamoto,
Ryu-Ichiro Hata, and Makoto Asashima
"Activin A Induces
Expression of Rat Sel-1/mRNA, a Negative Regulator
of Notch Signaling, in Rat Salivary Gland-Derived Epithelial Cell."
Biochemical and Biophysical Research
Communications. 282, 745-749, 2001
Kuroda, H., Inui, M., Sugimoto, K., Hataya,
T. and Asashima, M.
"Axial protocadherin is a mediator of
prenotochord cell sorting in Xenopus"
Developmental Biology, 244, 267-277, 2002
Onuma, Y., Takahashi, S., Asashima, M.,
Kurata, S. and Walter J. Gehring.
"Conservation of Pax 6 function and
upstream activation by Notch
signaling in eye development of frogs and flies"
PNAS, 99(4), 2020-2025, 2002
Kadoya, T., Yamamoto, H., Asashima, M.
Kikuchi, A., et.al.
"Desumoylation activity of Axam, a nobel
Axin-binding protein, is involved in downregulation of β-catenin "
Molecular and Cellular Biology, 22(11),
3803-3819, 2002
Emura, T., Asashima, M., Furue, M. and
Hasizume, K.
"Experimental split cord malformations
Pediatr."
Neutrosurg. 36, 229-235, 2002
Osafune, K., Nishinakamura, R., Komazaki,
S. and Asashima, M.
"In vitro induction of the pronephric
duct in Xenopus explants"
Develop. Growth Differ. 44, 161-167, 2002
Onuma, Y., Takahashi, S., Yokota, C. and
Asashima, M.
"Multiple nodal-related genes act
coordinately in Xenopus embryogenesis"
Developmental Biology, 241, 94-105, 2002
Kobayashi, M., Kishida, S., Kikuchi,
A.,et.al.
"Nuclear localization of Duplin, a
β-catenin-binding protein, is essential for its inhibitory activity on the Wnt
signaling pathway"
J. Biol. Chem., 277(8),5816-5822, 2002
Kakeda, M., Kyuno, J., Kato, T., Nishikawa,
M. and Asashima, M.
"Role of the thrombopoietin (TPO)/Mpl
system: c-Mpl-like molecule/TPO signaling enhances early hematopoiesis in
Xenopus laevis"
Develop. Growth Differ., 44, 63-75, 2002
Sedohara, A., Fukui, A., Michiue, T. and
Asashima, M.
"Role of BMP-4 in the including
ability of the head organizer in Xenopus laevis"
Zool. Sci., 19,67-80, 2002
Wada, M., Miyazawa, H., Wang, R., Mizuno,
T., Sato, A., Asashima, M. and Hanaoka,F.
"The second largest subunit of mouse
DNA polymeraseε, DPE2, interacts with SASP18 and recruits the Sin3 co-repressor
protein to DNA"
J. Biochem., 131, 307-311, 2002
Hayata, T., Tanegashima, K., Takahashi, S.,
Sogame. A. and Asashima, M.
Overexpression of the secreted factor Mig30
expressed in the Spemann organizer impairs morphogenetic movements during
Xenopus gastrulation"
Mechanisms of Development, 112, 37-51, 2002
Satow, R., Chan, T. and Asashima M.
"Molecular cloning and
characterization of dullard: a novel gene required for neural development"
B. B. R. C., 295, 85-91, 2002
M.Furue,M.Asashima, et.al.
"Activin A induces craniofacial
cartilage from undifferentiated Xenopus ectoderm in vitro"
PNAS,99(24),15474-15479,2002
Sato, A., Asashima,M. , Nishinakamura,
R.,et.al.
"Zinc finger protein
Sall2 is not essential for embryonic and kidney development"
Molecular and Cellular Biology, 23(1),
62-69, 2003
Ariizumi T. and Asashima, M.
"From field to gel blot:
teaching a holistic view of developmental phenomena to undergraduate biology
students at the University of Tokyo"
Int. J. Dev. Biol., 47, 93-97, 2003
Yabe, S., Tanegashima, K., Asashima, M.,
et.al.
"FRL-1, a member of the
EGF-CFC family, is essential for neural differentiation in Xenopus early
development"
Development, 130, 2071-2081, 2003
Yokota,C., M.Kofron, M.Zuck, D.W.Houston,
H.Isaacs, Asashima,M., C.C.Wylie ,J. Heasman
"A novel role for a
nodal-related protein Xnr3 regulates convergent extension movements via the
FGF receptor"
Development, 130, 2199-2212, 2003
Fukui,A., Komazaki S., Miyoshi, O. and
Asashima, M.
"Immunocytochemical
study of activin type IB receptor (XALK4) in Xenopus oocytes"
Develop. Growth Differ., 45, 113-119, 2003
Sogame, A., Hayata, T. and Asashima, M.
"Screening for novel
pancreatic genes from in vitro-induced pancreas in Xenopus"
Develop. Growth Differ., 45, 143-152, 2003
Hino, S., Michiue, T., Asashima, M. and
Kikuchi, A.
"Casein kinase Iε
enhances the binding of Dvl-1 to Frat-1 and is essential for Wnt-3a-induced
accumulation of β-catenin"
J. Biol. Chem., 278(16), 14066-14073, 2003
Kaneko, T., Chan, T., Satow, R., Fujita,
T., and Asashima, M.
"The isolation and
characterization of XC3H-3b: a CCCH zinc-finger protein required for pronephros
development"
B. B. R. C., 308, 566-572, 2003
Kyuno, J.-I., Fukui, A., Michiue, T., and
Asashima, M.
"Identification and
characterization of Xenopus NDRG1"
B. B. R. C., 309, 52-57, 2003
Okabayashi, K. and Asashima, M.
"Tissue generation from
amphibian animal caps"
Current Opinion in Genetics &
Development, 13, 1-6, 2003
Tanaka, M, Asashima, M., and Atomi, Y.
"Proliferation and
differentiation of Xenopus A6 cells under hypergravity as revealed by
time-lapse imaging"
In Vitro Cell. Dev. Biol. Animal, 39,
71-79, 2003
Asashima, M., and Okabayashi, K.
"Current state of and
outlook for organogenesis from undifferentiated cells"
CORNEA, 22(7), 2-12, 2003
Emura, T., Hashizume, K., and Asashima, M.
"Experimental study of
the embryogenesis of gastrointestinal duplication and enteric cyst"
Pediatr. Surg. Int., 19(3):147-151, 2003
Ariizumi, T., Kinoshita, M., Asashima, M,
et.al..
"Amphibian in vitro
heart induction: a simple and reliable model for the study of vertebrate
cardiac development"
Int. J. Dev. Biol., 47, 405-410, 2003
Sedohara, A., Komazaki, S., and Asashima.
M.
"In vitro induction and
transplantation of eye during early Xeonopus development"
Develop. Growth Differ., 45(5/6), 463-471,
2003
Fukui, Y., Furue, M., Myoishi, Y., Sato, J.
Denry, Okamoto, T., and Asashima M.
"Long-term culture of
Xenopus presumptive ectoderm in a nutrient-supplemented culture medium"
Develop. Growth Differ., 45(5/6), 499-506,
2003
Sekizaki, H., Takahashi, S., Tanegashima,
K., Onuma, Y., Haramoto, Y., and Asashima, M.
"Tracing of Xenopus
tropicalis germ plasm and presumptive primordial germ cells with the Xenopus
tropicalis DAZ-like gene"
Developmental Dynamics, 229(2), 367-372,
2004
Yoshida-Koide, U., Asashima. M., Koide, H.
,et.al.
"Involvement of Ras in
extraembryonic endoderm differentiation of embryonic stem cells. "
B. B. R. C., 313(3), 475-481, 2004
Y. Hojo, T. Hattori, T. Enami, S. Kawato,
et.al.
"Adult Male Rat hippocampus
Synthesizes Estradiol from Pregnenolone by Cytochromes P45017a and P450
Aromatase Localized in Neurons"
Proc. Natl. Acad. Sci. U.S.A. (2004) 101, 865-870
K. Shibuya, N. Takata, S. Kawato, et.al.
"Hippocampal cytochrome P450s
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